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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947834.1_cds_XP_016489355.1_79885
CDS Infomation

[gene=LOC107809266] [db_xref=GeneID:107809266] [protein=probable sodium/metabolite cotransporter BASS3, chloroplastic isoform X1] [protein_id=XP_016489355.1] [location=complement(join(74959..75202,75998..76245,76393..76699,76784..76879,78384..78766))] [gbkey=CDS]
Sequence

ATGTCATTAATTCCATCTTTATCCCTTAAATACCCAAAACCTTTTCTTTTATTCCCCAAT
TCAATATCTTCTTCAAACTCCAATTTCTCAATTTTGCATAGCAAGAACCGATATTTAAGC
TTTCAAGCTATAAAAAACGTAAAATGTCTTAATGGGGGCTCGTTAAACGCCGTTGCGTGT
TCGACTTCGTCGCCGTTAATTGGGAGAGTGGGTTTGCATAGACGGGAAGGTAACTTTTCG
TTACTGTCGTTTGGTGCAAATCCGAGGAGTTTTTATGTCGAAGACGAAAAGGCGGATTAT
TCACAAGCTTTGTCTGCATTGCTTCCATTTGTTGTGGCACTCACTGCTGTTGCTGCTCTT
TCTCAACCTTCCACTTTCACTTGGGTGTCTAAAGAATTGTACGCTCCTGCGCTTGGAGGA
ATCATGTTGTCAATTGGAATTAGACTTTCCATTGATGATTTTGCTCTCGCTATTAAAAGA
CCTTTGCCCTTATCTGTTGGATTCATTGCTCAATATGTCCTGAAGCCAGCTCTTGGCATA
ATTGTAGCACAGGCATTTGGGATGCCTCAGACATTCTACGCTGGTTTTGTCCTGATGTCT
TGTGTTGCTGGGGCTCAATTATCAAGTTATGCAAGCTTCTTGAGCAAAAGTGACGTGGCG
TTCAGTATTCTCTTGACCAGTTCAAGCACCATTGCTTCAGTTCTTGTTACTCCACTTTTA
ACTGGCCTTCTCATTGGTTCAGTCGTTCCAGTTGATGCAATTGCAATGTCAAAGTCAATC
TTGCAGGTCGTTCTTCTCCCAGTCACTCTTGGCTTAGCGCTGAACACCTATGCAAAACCA
GTAGTATCTGTTATTCAACCTGTGATGCCTTTCGTTGCCATGATTTGTACTTCACTGTGT
ATTGGCAGTCCTCTTGCAATCAACCGTGCTCAGATTCTTTCTGCTGAGGGTGCCAGGTTG
ATTGGTCCTGTACTGACATTTCATGCAGTGGCATTTGCAGTGGGTTATTGGTTCTCGAAA
CTTCCATTTTTTAGGTTTGAAGAAAAAGTCTGCAGGACAATTTCACTATGCACAGGAATG
CAGAGTTCCACGCTGGCAGGGCTTCTTGCAACTCAATTCCTTGGGAGCACTCAAGCGGTC
CCTCCTGCATGTTCTGTAGTTGCAATGGCTATCATGGGCCTTTGTCTTGCCTCTTTCTGG
GGAAGTGGATATCGGATCAGGGACATACCCTCCCTTCTCTTTCTACAAACTGCTTCGACA
ATCAAGCCTTCTCAGTAA

Peptide Sequence

PEP ID

XP_016489355.1
PEP Infomation

PREDICTED: probable sodium/metabolite cotransporter BASS3, chloroplastic isoform X1 [Nicotiana tabacum]
Sequence

MSLIPSLSLKYPKPFLLFPNSISSSNSNFSILHSKNRYLSFQAIKNVKCLNGGSLNAVAC
STSSPLIGRVGLHRREGNFSLLSFGANPRSFYVEDEKADYSQALSALLPFVVALTAVAAL
SQPSTFTWVSKELYAPALGGIMLSIGIRLSIDDFALAIKRPLPLSVGFIAQYVLKPALGI
IVAQAFGMPQTFYAGFVLMSCVAGAQLSSYASFLSKSDVAFSILLTSSSTIASVLVTPLL
TGLLIGSVVPVDAIAMSKSILQVVLLPVTLGLALNTYAKPVVSVIQPVMPFVAMICTSLC
IGSPLAINRAQILSAEGARLIGPVLTFHAVAFAVGYWFSKLPFFRFEEKVCRTISLCTGM
QSSTLAGLLATQFLGSTQAVPPACSVVAMAIMGLCLASFWGSGYRIRDIPSLLFLQTAST
IKPSQ

Transcript Sequence

Gene sequence data has not been registered.